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Getting started

  • Installation
  • Hands on
  • Examples
    • GADMA with structure model
    • GADMA with custom model
    • GADMA with custom model (momi)
    • Function gadma.optimize_ga
      • Function optimize_ga with ∂a∂i for (YRI, CEU) inference
      • Function optimize_ga with moments for (YRI, CEU) inference
    • Changing theta
    • GADMA with structure model (momentsLD)
    • Inference for four and five populations
  • F.A.Q.
  • Citations

User manual

  • Input data
  • Specifying an engine
  • Specifying a model
  • Inference
  • Repeats and parallel computing
  • Output
  • Plotting model
  • Extra parameter file
  • Units of parameters
  • Confidence intervals
  • Example parameters file

Development documentation

  • Changelogs
  • Development workflow
  • API
  • API examples
GADMA
  • Examples
  • Function gadma.optimize_ga
  • View page source

Function gadma.optimize_ga

  • Function optimize_ga with ∂a∂i for (YRI, CEU) inference
  • Function optimize_ga with moments for (YRI, CEU) inference
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